Abundance and genetic diversity of Quercus mulleri, microendemic, thretened species from Oaxaca
DOI:
https://doi.org/10.21829/myb.2020.2611782Keywords:
genetic structure, size structure, spatial distribution, microsatellitesAbstract
Quercus mulleri is a microendemic oak from the Sierra Sur of Oaxaca and is considered in IUCN red list of threatened species as “critically endangered”, however, due to lack of current information on the species, the conservation status of its populations is unknown, and therefore it has not been possible to allocate an appropriate risk category to it. This work represents the first report of Q. mulleri after more than 60 years of its last taxonomic classification, with the aim to analyze its abundance, distribution and genetic diversity to propose conservation strategies. The species was re-localized, and we found that it is restricted to a small region in Sierra Sur and is fragmented and geographically isolated. Species populations have low individual frequency by size class (6.13 ± 5.6). Allelic diversity values, using five microsatellite regions from the quru-GA series, were low (AT=22 y Ao=4.4), but genetic diversity values were relatively high (Ho=0.54), suggesting that the population went through a bottleneck. Results indicate that Q. mulleri is a vulnerable species, and since in its distribution area there is an ongoing habitat loss plus its population fragmentation, its permanence could be at risk, and for this we recommend including this species in the Norma Oficial Mexicana 059 as “Species at Extinction Risk”.Downloads
References
Aldrich, P. R., Michler, C. H., Sun, W., & Romero‐Severson, J. (2002). Microsatellite markers for northern red oak (Fagaceae: Quercus rubra). Molecular Ecology Notes, 2(4), 472-474. https://doi.org/10.1046/j.1471-8286.2002.00282.x DOI: https://doi.org/10.1046/j.1471-8286.2002.00282.x
Aldrich, P. R., Parker, G. R., Ward, J. S., & Michler, C. H. (2003). Spatial dispersion of trees in an old-growth temperate hardwood forest over 60 years of succession. Forest Ecology and Management, 180(1-3), 475-491. https://doi.org/10.1016/S0378-1127(02)00612-6 DOI: https://doi.org/10.1016/S0378-1127(02)00612-6
Alfonso-Corrado, C., Clark-Tapia, R., & Mendoza, A. (2007). Demography and management of two clonal oaks: Quercus eduardii and Q. potosina (Fagaceae) in central México. Forest Ecology and Management, 251(3), 129-141. https://doi.org/10.1016/j.foreco.2006.11.004 DOI: https://doi.org/10.1016/j.foreco.2006.11.004
Alfonso-Corrado, C., Clark-Tapia, R., Monsalvo-Reyes, A., Rosas-Osorio, C., González-Adame, G., Naranjo-Luna, F., Venegas-Barrera, C., & Campos, J. E. (2014). Ecological-Genetic Studies and Conservation of Endemic Quercus sideroxyla (Trel.) in Central Mexico. Natural Resources, 05(09), 442-453. https://doi.org/10.4236/nr.2014.59041 DOI: https://doi.org/10.4236/nr.2014.59041
Alfonso-Corrado, C., Esteban-Jiménez, R., Clark-Tapia, R., Piñero, D., Campos, J. E., & Mendoza, A. (2004). Clonal and genetic structure of two Mexican oaks: Quercus eduardii and Quercus potosina (Fagaceae). Evolutionary Ecology, 18(5-6), 585-599. https://doi.org/10.1007/s10682-004-5145-5 DOI: https://doi.org/10.1007/s10682-004-5145-5
Aronson, J., Pereira, J. S., & Pausas, J. G. (Ed.). (2012). Cork Oak Woodlands on the Edge: Ecology, Adaptive Management, and Restoration. Restoration Ecology (Vol. 18). Island press Washington, DC: https://doi.org/10.1111/j.1526-100x.2010.00701.x DOI: https://doi.org/10.1111/j.1526-100X.2010.00701.x
Baskauf, C. J., McCauley, D. E., & Eickmeier, W. G. (1994). Genetic analysis of a rare and a widespread species of Echinacea (Asteraceae). Evolution, 48(1), 180-188. https://doi.org/10.2307/2410013 DOI: https://doi.org/10.1111/j.1558-5646.1994.tb01304.x
Belkhir, K., Borsa, P., Chikhi, L., Raufaste, N., & Bonhomme, F. (2004). GENETIX 4.05, logiciel sous Windows TM pour la génétique des populations. Montpellier, France: Institut des sciences de lévolution, CNRS UMR 5554, Université de Montpellier II.
Brook, R. K., & McLachlan, S. M. (2008). Trends and prospects for local knowledge in ecological and conservation research and monitoring. Biodiversity and Conservation, 17(14), 3501-3512. https://doi.org/10.1007/s10531-008-9445-x DOI: https://doi.org/10.1007/s10531-008-9445-x
Bruschi, P., Vendramin, G. G., Bussotti, F., & Grossoni, P. (2000). Morphological and molecular differentiation between Quercus petraea (Matt.) Liebl. and Quercus pubescens Willd. (Fagaceae) in Northern and Central Italy. Annals of Botany, 85(3), 325-333. https://doi.org/10.1006/anbo.1999.1046 DOI: https://doi.org/10.1006/anbo.1999.1046
Cottrell, J. E., Munro, R. C., Tabbener, H. E., Milner, A. D., Forrest, G. I., & Lowe, A. J. (2003). Comparison of fine-scale genetic structure using nuclear microsatellites within two British oakwoods differing in population history. Forest Ecology and Management, 176(1-3), 287-303. https://doi.org/10.1016/S0378-1127(02)00289-X DOI: https://doi.org/10.1016/S0378-1127(02)00289-X
Crawford, D. J., Ruiz, E., Stuessy, T. F., Tepe, E., Aqeveque, P., Gonzalez, F., Jensen, R. J., Anderson G. J., Bernardello, G., Baeza C. M., Swenson, U., & Silva O. M. (2007). Allozyme diversity in endemic flowering plant species of the Juan Fernandez Archipelago, Chile: ecological and historical factors with implications for conservation. American Journal of Botany, 88(12), 2195-2203. https://doi.org/10.2307/3558381 DOI: https://doi.org/10.2307/3558381
Curtu, A. L., Gailing, O., Leinemann, L., & Finkeldey, R. (2007). Genetic variation and differentiation within a natural community of five oak species (Quercus spp.). Plant Biology, 9(1), 116-126. https://doi.org/10.1055/s-2006-924542 DOI: https://doi.org/10.1055/s-2006-924542
Degen, B. (2002). SGS--Spatial Genetic Software: A Computer Program for Analysis of Spatial Genetic and Phenotypic Structures of Individuals and Populations. Journal of Heredity, 92(5), 447–448. https://doi.org/10.1093/jhered/92.5.447 DOI: https://doi.org/10.1093/jhered/92.5.447
Deichsel, G., & Trampisch, H. J. (1985). Cluster analysis and discriminant analysis. Stuttgart, Germany: Gustav Fisher.
Dodd, S. C., & Helenurm, K. (2002). Genetic diversity in Delphinium variegatum (Ranunculaceae): A comparison of two insular endemic subspecies and their widespread mainland relative. American Journal of Botany, 89(4), 613-622. https://doi.org/10.3732/ajb.89.4.613 DOI: https://doi.org/10.3732/ajb.89.4.613
Epperson, B. K. (1992). Spatial structure of genetic variation within populations of forest trees. New Forests, 6(1-4), 257-278. https://doi.org/10.1007/BF00120648 DOI: https://doi.org/10.1007/BF00120648
Ewers, R. M., & Didham, R. K. (2006). Confounding factors in the detection of species responses to habitat fragmentation. Biological Reviews of the Cambridge Philosophical Society, 81(1), 117-142. https://doi.org/10.1017/S1464793105006949 DOI: https://doi.org/10.1017/S1464793105006949
Excoffier, L., Laval, G., & Schneider, S. (2007). Arlequin (version 3.0): an integrated software package for population genetics data analysis. Evolutionary bioinformaticsonline, 1, 47–50. https://doi.org/10.1177/117693430500100003 DOI: https://doi.org/10.1177/117693430500100003
Folke, C., Carpenter, S., Walker, B., Scheffer, M., Elmqvist, T., Gunderson, L., & Holling, C. S. (2004). Regime shifts, resilience, and biodiversity in ecosystem management. Annual Review of Ecology, Evolution and Systematics., 35, 557-581. https://doi.org/10.1146/annurev.ecolsys.35.021103.105711 DOI: https://doi.org/10.1146/annurev.ecolsys.35.021103.105711
Frankham, R. (1997). Do island populations have less genetic variation than mainland populations? Heredity 78, 311–327. https://doi.org/10.1038/hdy.1997.46 DOI: https://doi.org/10.1038/hdy.1997.46
García-Méndez, S. (2014). Diversidad genética y efecto del cambio climático en la distribución de Quercus potosina (Fagaceae) en Sierra Fría, Aguascalientes: Un enfoque local para su conservación. Tesis de licenciatura, Universidad de la Sierra Juárez, Oaxaca, México.
Ghazoul, J. (2005). Pollen and seed dispersal among dispersed plants. Biological Reviews of the Cambridge Philosophical Society, 80(3), 413-443. https://doi.org/10.1017/S1464793105006731 DOI: https://doi.org/10.1017/S1464793105006731
Gitzendanner, M. A., & Soltis, P. S. (2000). Patterns of genetic variation in rare and widespread plant congeners. American Journal of Botany, 87(6), 783-792. https://doi.org/10.2307/2656886 DOI: https://doi.org/10.2307/2656886
Gorgonio-Ramírez, M. (2012). Variabilidad y estructura genética de Quercus eduardii (Fagaceae) en Sierra Fría, Aguascalientes. Tesis de licenciatura, Universidad de la Sierra Juárez, Oaxaca, México.
Gorgonio-Ramírez, M. (2015). Ecología genética de Quercus crassifolia (Fagaceae) en sitios de manejo forestal y de uso local en Sierra Juárez, Oaxaca. Tesis de maestría, Universidad de la Sierra Juárez, Oaxaca, México.
Hamrick, J. L., & Godt, M. J. W. (1989). Allozyme diversity in plant species. En A. H. D. Brown, M. T. Clegg, A. L. Kahler, & B. S. Weir (Eds.), Plant population genetics, breeding and genetic resources (pp. 43-63). Sunderland, Mass: Sinauer Press.
Hedrick, P. W. (2011). Genetics of Populations. Jones and Bartlett Publishers, Sudbury, MA.
Jensen, J. S., Olrik, D. C., Siegismund, H. R. & Lowe A. J. (2003). Population Genetics and Spatial Autocorrelation in an Unmanaged Stand of Quercus petraea in Denmark, Scandinavian Journal of Forest Research, 18(4), 295-304. https://doi.org/10.1080/02827580310005072 DOI: https://doi.org/10.1080/02827580310005072
Jones, M. C., Dye, S. R., Fernandes, J. A., Frölicher, T. L., Pinnegar, J. K., Warren, R., & Cheung, W. W. L. (2013). Predicting the Impact of Climate Change on Threatened Species in UK Waters. PLoS ONE, 8(1), e54216. https://doi.org/10.1371/journal.pone.0054216 DOI: https://doi.org/10.1371/journal.pone.0054216
Kaul, R. B. (2006). Reproductive Morphology of Quercus (Fagaceae). American Journal of Botany, 72(12), 1962-1977. https://doi.org/10.2307/2443613 DOI: https://doi.org/10.1002/j.1537-2197.1985.tb08470.x
Kawaji, M., Kaneko, S., Tateno, R., Isagi, Y., & Yoneda, T. (2009). Development of microsatellite markers for Quercus miyagii Koidz. (Fagaceae), an endemic species in the Ryukyu Islands, Japan. Conservation Genetics, 10(4), 1049-1051. https://doi.org/10.1007/s10592-008-9685-z DOI: https://doi.org/10.1007/s10592-008-9685-z
Knaepkens, G., Bervoets, L., Verheyen, E., & Eens, M. (2004). Relationship between population size and genetic diversity in endangered populations of the European bullhead (Cottus gobio): Implications for conservation. Biological Conservation, 115(3), 403-410. https://doi.org/10.1016/S0006-3207(03)00156-3 DOI: https://doi.org/10.1016/S0006-3207(03)00156-3
Martínez-Palacios, A., Eguiarte, L. E., & Furnier, G. R. (1999). Genetic diversity of the endangered endemic Agave victoriae-reginae (Agavaceae) in the Chihuahuan Desert. American Journal of Botany, 86(8), 1093-1098. https://doi.org/10.2307/2656971 DOI: https://doi.org/10.2307/2656971
Martínez, M. (1953). Una nueva especie de Quercus. Anales del Instituto de Biología de la Universidad Nacional Autónoma de México. Serie Botánica, 24(1), 51-53. https://doi.org/10.1111/j.1471-8286.2004.00770.x
Maruyama, T., & Fuerst, P. A. (1985). Population bottlenecks and nonequilibrium models in population genetics. II. Number of alleles in a small population that was formed by a recent bottleneck. Genetics, 111(3), 675-689. DOI: https://doi.org/10.1093/genetics/111.3.675
McDonald, R. I., Peet, R. K., & Urban, D. L. (2003). Spatial pattern of Quercus regeneration limitation and Acer rubrum invasion in a Piedmont forest. Journal of Vegetation Science, 14(3), 441-450. https://doi.org/10.1111/j.1654-1103.2003.tb02170.x DOI: https://doi.org/10.1111/j.1654-1103.2003.tb02170.x
Meiners Ochoa, M., & Hernández-López, L. (2007). Únicamente en México especies endémicas y las plantas de Jalisco. Biodiversitas, 71, 16-19.
Meirmans, P. G., & Van Tienderen, P. H. (2004). GENOTYPE and GENODIVE: two programs for the analysis of genetic diversity of asexual organisms. Molecular Ecology Notes, 4(4), 792-794. https://doi.org/10.1111/j.1471-8286.2004.00770.x DOI: https://doi.org/10.1111/j.1471-8286.2004.00770.x
Miller, M. P. (1997). Tools for Population Genetic Analysis (TFPGA) 1.3: a Windows Program for the Analysis of Elysium and Molecular Population Genetic Data. Department of Biological Sciences, Northern Arizona University, USA.
Molina-Garay, C. (2011). Diversidad genética y estructura poblacional de Q. macdougallii (Fagaceae) encino endémico de la Sierra Norte Oaxaca México. Tesis de licenciatura, Universidad Nacional Autónoma de México, Ciudad de México, México.
Murcia, C. (1995). Edge effects in fragmented forests: implications for conservation. Trends in ecology y evolution, 10(2), 58-62. https://doi.org/10.1016/S0169-5347(00)88977-6 DOI: https://doi.org/10.1016/S0169-5347(00)88977-6
Nei, M. (1978). Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics, 89(3), 583-590. DOI: https://doi.org/10.1093/genetics/89.3.583
Oldfield, S., & Eastwood, A. (2007). The Red List of Oaks. IUCN. Cambridge. UK: Fauna y Flora International.
Pakkad, G., Ueno, S., & Yoshimaru, H. (2008). Genetic diversity and differentiation of Quercus semiserrata Roxb. in northern Thailand revealed by nuclear and chloroplast microsatellite markers. Forest Ecology and Management, 255(3-4), 1067-1077. https://doi.org/10.1016/j.foreco.2007.10.021 DOI: https://doi.org/10.1016/j.foreco.2007.10.021
Pimm, S. L., & Raven, P. (2000). Biodiversity: extinction by numbers. Nature, 403(6772), 843. https://doi.org/10.1038/35002708 DOI: https://doi.org/10.1038/35002708
Premoli, A. C. (1997). Genetic variation in a geographically restricted and two widespread species of South American Nothofagus. Journal of Biogeography, 24, 883-892. DOI: https://doi.org/10.1046/j.1365-2699.1997.00115.x
Qiu, Y.-X., Hong, D.-Y., Fu, C.-X., & Cameron, K. M. (2004). Genetic variation in the endangered and endemic species Changium smyrnioides (Apiaceae). Biochemical Systematics and Ecology, 32(6), 583-596. https://doi.org/10.1016/j.bse.2003.08.004 DOI: https://doi.org/10.1016/j.bse.2003.08.004
Rabinowitz, D., Cairns, S., & Dillon, T. (1986). Seven forms of rarity and their frequency in the flora of the British Isles. En M. E. Soule (Ed.), Conservation Biology: the science of scarcity and diversity (pp. 182-204). Sinawer, Sunderland, Massachusetts: Sinauer Associates.
Rosas-Osorio, J. C., Alfonso-Corrado, C., Monsalvo-Reyes, A., Clark-Tapia, R., Lira-Saade, R., & Campos-Contreras, J. (2010). The genetic variability of Quercus grisea Liebm. In the Sierra Fría of Aguascalientes, México. International Oak Journal, 21, 64-72.
Sánchez-Hernández, C., & Gaytán-Oyarzún, J. C. (2006). Two mini-preparation protocols to DNA extraction from plants with high polysaccharide and secondary metabolites. African Journal of Biotechnology, 5(20).
Secretaría de Medio Ambiente y Recursos Naturales [SEMARNAT]. (2010). Norma Oficial Mexicana NOM-059-SEMARNAT-2010: Protección ambiental-especies nativas de México de flora y fauna silvestres-categorías de riesgo y especificaciones para su inclusión, exclusión o cambio-lista de especies en riesgo. México:SEMARNAT.
Sekercioglu, C. H., Schneider, S. H., Fay, J. P., & Loarie, S. R. (2008). Climate change, elevational range shifts, and bird extinctions. Conservation biology, 22(1), 140-150. https://doi.org/10.1111/j.1523-1739.2007.00852.x DOI: https://doi.org/10.1111/j.1523-1739.2007.00852.x
Sork, V. L., Bramble, J., & Sexton, O. (1993). Ecology of mast‐fruiting in three species of North American deciduous oaks. Ecology, 74(2), 528-541. https://doi.org/10.2307/1939313 DOI: https://doi.org/10.2307/1939313
Soto, A., Lorenzo, Z., & Gil, L. (2007). Differences in fine-scale genetic structure and dispersal in Quercus ilex L. and Q. suber L.: Consequences for regeneration of mediterranean open woods. Heredity, 99(6), 601-607. https://doi.org/10.1038/sj.hdy.6801007 DOI: https://doi.org/10.1038/sj.hdy.6801007
Steinkellner, H., Fluch, S., Turetschek, E., Lexer, C., Streiff, R., Kremer, A., Burg K., & Glössl, J. (1997). Identification and characterization of (GA/CT)(n)-microsatellite loci from Quercus petraea. Plant Molecular Biology, 33(6), 1093-1096. https://doi.org/10.1023/A:1005736722794 DOI: https://doi.org/10.1023/A:1005736722794
Valbuena-Carabaña, M., González-Martínez, S. C., Sork, V. L., Collada, C., Soto, A., Goicoechea, P. G., & Gil, L. (2005). Gene flow and hybridisation in a mixed oak forest (Quercus pyrenaica Willd. and Quercus petraea (Matts.) Liebl.) in central Spain. Heredity, 95(6), 457-465. https://doi.org/10.1038/sj.hdy.6800752 DOI: https://doi.org/10.1038/sj.hdy.6800752
Valencia, S. A., & Nixon, K. C. (2004). Encinos. En A. J. García, M. Ordóñez, y Briones-Salas (Eds), Biodiversidad de Oaxaca. (pp. 219-225). Ciudad de México, México: Instituto de Biología, Universidad Nacional Autónoma de México.
Wang, L., Guo, J., & Zhao, G. F. (2006). Genetic diversity of the endangered and endemic species Psathyrostachys huashanica natural populations using simple sequence repeats (SSRs) markers. Biochemical Systematics and Ecology, 34(4), 310-318. https://doi.org/10.1016/j.bse.2005.09.009 DOI: https://doi.org/10.1016/j.bse.2005.09.009
White, G. M., Boshier, D. H., & Powell, W. (2002). Increased pollen flow counteracts fragmentation in a tropical dry forest: An example from Swietenia humilis Zuccarini. Proceedings of the National Academy of Sciences, 99(4), 2038-2042. https://doi.org/10.1073/pnas.042649999 DOI: https://doi.org/10.1073/pnas.042649999
Wright, S. (2006). The Interpretation of Population Structure by F-Statistics with Special Regard to Systems of Mating. Evolution, 19(3), 395. https://doi.org/10.2307/2406450 DOI: https://doi.org/10.2307/2406450
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